Semantic Segmentation Models

Click to open in: [GitHub][Colab]

About this demo

Semantic segmentation in image processing means partitioning the image into its constructing segments so that each segment corresponds to a specific category of an object present in the image. In other words, semantic segmentation can be considered as classifying each pixel in the image into a pre-defined category. Note that semantic segmentation does not differentiate instances of the same object, like the figure below which shows three examples of road images with their semantic segmentation. You can see how all objects of the same class have the same colour (please refer to here and here to find more information on the semantic segmentation task).

Image courtesy of: Chen, Liang-Chieh, et al. “Deeplab: Semantic image segmentation with deep convolutional nets, atrous convolution, and fully connected crfs.” IEEE transactions on pattern analysis and machine intelligence 40.4 (2017): 834-848.

Similar to natural images, semantic segmentation of histology images is the task of identifying the class of each pixel in the image based on the object or tissue type of the region encompassing that pixel. Semantic segmentation of tissue regions in histology images plays an important role in developing algorithms for cancer diagnosis and prognosis as it can help measure tissue attributes in an objective and reproducible fashion.

Example of semantic segmentation in histology images where pixels are classified based on different region types including tumour, fat, inflammatory, necrosis etc.

In this example notebook, we are showing how you can use pretrained models to do automatically segment different tissue region types in a set of input images or WSIs. We first focus on a pretrained model incorporated in the TIAToolbox to achieve semantic annotation of tissue region in histology images of breast cancer. After that, we will explain how you can use your pretrained model in the TIAToolbox model inference pipeline to do prediction on a set WSIs.

Importing related libraries

We import some standard Python modules, and also the Python module wsireader (see details) written by the TIA Centre team.

"""Import modules required to run the Jupyter notebook."""

# Clear logger to use tiatoolbox.logger
import logging
import warnings

if logging.getLogger().hasHandlers():
    logging.getLogger().handlers.clear()

import matplotlib as mpl
import matplotlib.pyplot as plt
import numpy as np
import torch
from matplotlib import cm

from tiatoolbox import logger
from tiatoolbox.models.architecture.unet import UNetModel
from tiatoolbox.models.engine.semantic_segmentor import (
    IOSegmentorConfig,
    SemanticSegmentor,
)
from tiatoolbox.utils.misc import download_data, imread
from tiatoolbox.utils.visualization import overlay_prediction_mask
from tiatoolbox.wsicore.wsireader import WSIReader

mpl.rcParams["figure.dpi"] = 300  # for high resolution figure in notebook
mpl.rcParams["figure.facecolor"] = "white"  # To make sure text is visible in dark mode
warnings.filterwarnings("ignore")

Downloading the required files

We download, over the internet, image files used for the purpose of this notebook. In particular, we download a histology tile and a whole slide image of cancerous breast tissue samples to show how semantic segmentation models work. Also, pretrained weights of a Pytorch model and a small WSI are downloaded to illustrate how you can incorporate your own models in the existing TIAToolbox segmentation tool.

In Colab, if you click the files icon (see below) in the vertical toolbar on the left hand side then you can see all the files which the code in this notebook can access. The data will appear here when it is downloaded.

# These file name are used for
img_file_name = "sample_tile.jpg"
wsi_file_name = "sample_wsi.svs"
mini_wsi_file_name = "mini_wsi.svs"
model_file_name = "tissue_mask_model.pth"

logger.info("Download has started. Please wait...")

# Downloading sample image tile
download_data(
    "https://tiatoolbox.dcs.warwick.ac.uk/sample_imgs/breast_tissue.jpg",
    img_file_name,
)

# Downloading sample whole-slide image
download_data(
    "https://tiatoolbox.dcs.warwick.ac.uk/sample_wsis/wsi4_12k_12k.svs",
    wsi_file_name,
)

# Downloading mini whole-slide image
download_data(
    "https://tiatoolbox.dcs.warwick.ac.uk/sample_wsis/CMU-1.ndpi",
    mini_wsi_file_name,
)

# Download external model
download_data(
    "https://tiatoolbox.dcs.warwick.ac.uk//models/seg/fcn-tissue_mask.pth",
    model_file_name,
)

logger.info("Download is complete.")

|2023-12-15|15:51:05.649| [INFO] Download has started. Please wait...
|2023-12-15|15:54:21.662| [INFO] Download is complete.

Semantic segmentation using TIAToolbox pretrained models

In this section, we will investigate the use of semantic segmentation models that have been already trained on a specific task and incorporated in the TIAToolbox. Particularly, the model we demonstrate can estimate the probability of each pixel in an image (tile or whole slide images) of breast cancer sample belonging to one of the following classes:

• Tumour

• Stroma

• Inflammatory

• Necrosis

• Others (nerves, vessels, blood cells, adipose, etc.)

More information on the model and the dataset used for training can be found here (Amgad et al., “Structured crowdsourcing enables convolutional segmentation of histology image”) and the data is available for download using this link.

Inference on tiles

Much similar to the patch classifier functionality of the tiatoolbox, the semantic segmentation module works both on image tiles and structured WSIs. First, we need to create an instance of the SemanticSegmentor class which controls the whole process of semantic segmentation task and then use it to do prediction on the input image(s):

# Tile prediction
bcc_segmentor = SemanticSegmentor(
    pretrained_model="fcn_resnet50_unet-bcss",
    num_loader_workers=4,
    batch_size=4,
)

output = bcc_segmentor.predict(
    [img_file_name],
    save_dir="sample_tile_results/",
    mode="tile",
    resolution=1.0,
    units="baseline",
    patch_input_shape=[1024, 1024],
    patch_output_shape=[512, 512],
    stride_shape=[512, 512],
    on_gpu=ON_GPU,
    crash_on_exception=True,
)

Show code cell output Hide code cell output

|2023-12-15|15:55:36.815| [WARNING] WSIPatchDataset only reads image tile at `units="baseline"`. Resolutions will be converted to baseline value.
|2023-12-15|15:55:37.332| [WARNING] WSIPatchDataset only reads image tile at `units="baseline"`. Resolutions will be converted to baseline value.
|2023-12-15|15:55:37.800| [WARNING] Raw data is None.
|2023-12-15|15:55:37.805| [WARNING] Unknown scale (no objective_power or mpp)
Process Batch:   0%|                                     | 0/16 [00:00<?, ?it/s]|2023-12-15|15:55:38.881| [WARNING] Raw data is None.
|2023-12-15|15:55:39.031| [WARNING] Raw data is None.
|2023-12-15|15:55:39.061| [WARNING] Raw data is None.
|2023-12-15|15:55:39.108| [WARNING] Raw data is None.
Process Batch: 100%|############################| 16/16 [00:12<00:00,  1.28it/s]

|2023-12-15|15:55:50.367| [INFO] Finish: 0
|2023-12-15|15:55:50.374| [INFO] --Input: sample_tile.jpg
|2023-12-15|15:55:50.375| [INFO] --Output: /content/sample_tile_results/0

There we go! With only two lines of code, thousands of images can be processed automatically. There are many parameters associated with SemanticSegmentor. We explain these as we meet them, while proceeding through the notebook. Here we explain only the ones mentioned above:

• pretrain_model: specifies the name of the pretrained model included in the TIAToolbox (case-sensitive). We are expanding our library of models pretrained on various segmentation tasks. You can find a complete list of available pretrained models here. In this example, we use the "fcn_resnet50_unet-bcss" pretrained model, which is a fully convolutional network that follows UNet network architecture and benefits from a ResNet50 model as its encoder part.

• num_loader_workers: as the name suggests, this parameter controls the number of CPU cores (workers) that are responsible for the “loading of network input” process, which consists of patch extraction, preprocessing, etc.

• batch_size: controls the batch size, or the number of input instances to the network in each iteration. If you use a GPU, be careful not to set the batch_size larger than the GPU memory limit would allow.

After the bcc_segmentor has been instantiated as a semantic segmentation engine with our desired pretrained model, one can call the predict method to do inference on a list of input images (or WSIs). The predict function automatically processes all the images on the input list and saves the results on the disk. The process usually comprises patch extraction (because the whole tile or WSI won’t fit into limited GPU memory), preprocessing, model inference, post-processing and prediction assembly. There some important parameters that should be set to use the predict method properly:

• imgs: List of inputs to be processed. Note that items in the list should be paths to the inputs stored on the disk.

• save_dir: Path to the main folder in which prediction results for each input will be stored separately.

• mode: the mode of inference which can be set to either 'tile' or 'wsi' for plain histology images or structured whole slides images, respectively.

• resolution and unit: specify the resolution on which we want to process the input. Because plain images only have a baseline layer, the options in this case should always be the defaults units="baseline" and resolution=1.0 and, as defaults, can be omitted.

• patch_input_shape: the shape of the patches extracted from the input image (WSI) to be fed into the model. The bigger the patch size the more GPU memory is needed.

• patch_output_shape: The expected shape of output prediction maps for patches. This should be set based on the knowledge we have from the model design. For example, we know that the shape of output maps from "fcn_resnet50_unet-bcss" model is half of the input shape in each dimension. Therefore, as we set the patch_input_shape=[1024, 1024]), we need to set the patch_output_shape=[512, 512].

• stride_shape: Stride of output patches during tile and WSI processing. This parameter is used to set the amount of overlap between neighbouring prediction patches. Based on this parameter, the toolbox automatically calculates the patch extraction stride.

• on_gpu: can be either True or False to dictate running the computations on GPU or CPU.

• crash_on_exception: If set to True, the running loop will crash if there is an error during processing a WSI. Otherwise, the loop will move on to the next image (wsi) for processing. We suggest that you first make sure that prediction is working as expected by testing it on a couple of inputs and then set this flag to False to process large cohorts of inputs.

We should mention that when you are using TIAToolbox pretrained models, you don’t need to worry about setting the input/output shape parameters as their optimal values will be loaded by default.

In the output, the prediction method returns a list of the paths to its inputs and to the processed outputs saved on the disk. This can be used for loading the results for processing and visualisation.

logger.info(
    "Prediction method output is: %s, %s",
    output[0][0],
    output[0][1],
)
tile_prediction_raw = np.load(
    output[0][1] + ".raw.0.npy",
)  # Loading the first prediction [0] based on the output address [1]
logger.info(
    "Raw prediction dimensions: (%d, %d, %d)",
    tile_prediction_raw.shape[0],
    tile_prediction_raw.shape[1],
    tile_prediction_raw.shape[2],
)

# Simple processing of the raw prediction to generate semantic segmentation task
tile_prediction = np.argmax(
    tile_prediction_raw,
    axis=-1,
)  # select the class with highest probability
logger.info(
    "Processed prediction dimensions: (%d, %d)",
    tile_prediction.shape[0],
    tile_prediction.shape[1],
)

# showing the predicted semantic segmentation
tile = imread(img_file_name)
logger.info(
    "Input image dimensions: (%d, %d, %d)",
    tile.shape[0],
    tile.shape[1],
    tile.shape[2],
)

fig = plt.figure()
label_names_dict = {
    0: "Tumour",
    1: "Stroma",
    2: "Inflamatory",
    3: "Necrosis",
    4: "Others",
}
for i in range(5):
    ax = plt.subplot(1, 5, i + 1)
    (
        plt.imshow(tile_prediction_raw[:, :, i]),
        plt.xlabel(
            label_names_dict[i],
        ),
        ax.axes.xaxis.set_ticks([]),
        ax.axes.yaxis.set_ticks([]),
    )
fig.suptitle("Row prediction maps for different classes", y=0.65)

# showing processed results
fig2 = plt.figure()
ax1 = plt.subplot(1, 2, 1), plt.imshow(tile), plt.axis("off")
ax2 = plt.subplot(1, 2, 2), plt.imshow(tile_prediction), plt.axis("off")
fig2.suptitle("Processed prediction map", y=0.82)

|2023-12-15|15:55:50.547| [INFO] Prediction method output is: sample_tile.jpg, /content/sample_tile_results/0
|2023-12-15|15:55:50.670| [INFO] Raw prediction dimensions: (4000, 4000, 5)
|2023-12-15|15:55:50.993| [INFO] Processed prediction dimensions: (4000, 4000)
|2023-12-15|15:55:51.345| [INFO] Input image dimensions: (4000, 4000, 3)

Text(0.5, 0.82, 'Processed prediction map')

As printed above, the raw prediction array has 5 channels (size 4000x4000x5) which indicate the 5 categories that our segmentation model can distinguish. These prediction channels are illustrated in the first row, one-by-one, where each prediction map stands for a specific tissue region class. However, the idea is to have a single prediction map that contains specific values for each class. Therefore, we use a very simple post-processing technique to acquire the semantic segmentation map:

tile_prediction = np.argmax(tile_prediction_raw, axis=-1)

that finds, for each pixel, the class index that has the highest estimated probability. In the processed prediction map dark blue, light blue, dark green, light green, and yellow colours stand for tumour, stroma, inflamatory, necrosis, and other region types, respectively.

Inference on WSIs

The next step is to use the TIAToolbox’s embedded model for region segmentation in a whole slide image. The process is quite similar to what we have done for tiles. Here we just introduce a some important parameters that should be considered when configuring the segmentor for WSI inference.

bcc_segmentor = SemanticSegmentor(
    pretrained_model="fcn_resnet50_unet-bcss",
    num_loader_workers=4,
    batch_size=4,
    auto_generate_mask=False,
)

bcc_wsi_ioconfig = IOSegmentorConfig(
    input_resolutions=[{"units": "mpp", "resolution": 0.25}],
    output_resolutions=[{"units": "mpp", "resolution": 0.25}],
    patch_input_shape=[1024, 1024],
    patch_output_shape=[512, 512],
    stride_shape=[512, 512],
    save_resolution={"units": "mpp", "resolution": 2},
)

Here we re-defined the bcc_segmentor just to show the use of auto_generate_mask parameter. By setting this parameter to True, we are telling the TIAToolbox to automatically extract the tissue masks of the input WSIs if they are not provided in the predict function parameters. In this example, we leave auto_generate_mask=False because we are using a WSI that only contains tissue region (there is no background region) and therefore there is no need for tissue mask extraction.

When doing inference on WSIs, it is important to set the data stream configurations (such as input resolution, output resolution, size of merged predictions, etc.) appropriately for each model and application. In TIAToolbox, IOSegmentorConfig class is used to set these configurations as we have done in the above cell. Parameters of IOSegmentorConfig have self-explanatory names, but let’s have look at their definition:

• input_resolutions: a list specifying the resolution of each input head of model in the form of a dictionary. List elements must be in the same order as target model.forward(). Of course, if your model accepts only one input, you just need to put one dictionary specifying 'units' and 'resolution'. But it’s good to know that TIAToolbox supports a model with more than one input!

• output_resolutions: a list specifying the resolution of each output head from model in the form of a dictionary. List elements must be in the same order as target model.infer_batch().

• patch_input_shape: Shape of the largest input in (height, width) format.

• patch_output_shape: Shape of the largest output in (height, width) format.

• save_resolution: specifies the resolution in which processed (merged) output will be saved. Commonly, we desire the resolution (size) of the output segmentation map to be smaller than the input map. For example, we don’t need the tissue segmentation results to be as high-resolution as input WSI. Therefore, this parameter can be set based on the model, task, and desired output size.

# WSI prediction
wsi_output = bcc_segmentor.predict(
    imgs=[wsi_file_name],
    masks=None,
    save_dir="sample_wsi_results/",
    mode="wsi",
    ioconfig=bcc_wsi_ioconfig,
    on_gpu=ON_GPU,
    crash_on_exception=True,
)

Show code cell output Hide code cell output

|2023-12-15|15:56:03.376| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
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|2023-12-15|15:56:03.678| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:03.700| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:03.696| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:03.713| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
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|2023-12-15|15:56:03.746| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:03.749| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
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|2023-12-15|15:56:04.243| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:04.376| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:04.382| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
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|2023-12-15|15:56:04.405| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:04.530| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
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|2023-12-15|15:56:06.210| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:06.287| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:06.304| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
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|2023-12-15|15:56:06.563| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:06.561| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:06.673| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:06.697| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:06.839| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:06.845| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:06.888| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:06.905| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:06.950| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:   1%|3                           | 2/144 [00:03<03:52,  1.64s/it]|2023-12-15|15:56:07.060| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:07.082| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:07.160| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:07.169| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:07.262| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:07.276| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:07.345| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:07.364| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:07.470| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:07.468| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:07.472| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:07.492| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:07.642| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:   2%|5                           | 3/144 [00:04<02:48,  1.19s/it]|2023-12-15|15:56:07.759| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:07.767| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:07.786| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:07.805| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:07.875| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:07.884| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:07.935| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:07.951| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:08.160| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:08.189| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:08.182| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:08.198| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:08.252| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:08.264| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:08.334| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:   3%|7                           | 4/144 [00:05<02:18,  1.01it/s]|2023-12-15|15:56:08.421| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:08.432| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:08.544| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:08.556| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:08.635| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:08.648| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:08.777| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:08.793| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:08.885| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:08.898| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:08.954| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:   3%|9                           | 5/144 [00:05<01:58,  1.17it/s]|2023-12-15|15:56:09.026| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:09.028| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:09.045| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:09.036| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:09.289| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:09.291| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:09.339| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:09.352| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:09.490| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:   4%|#1                          | 6/144 [00:06<01:42,  1.35it/s]|2023-12-15|15:56:09.556| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:09.553| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:09.567| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:09.570| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:09.828| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:09.841| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:09.924| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:09.931| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:10.060| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:   5%|#3                          | 7/144 [00:06<01:34,  1.45it/s]|2023-12-15|15:56:10.131| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:10.141| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:10.182| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:10.199| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:10.413| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:10.426| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:10.517| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:10.532| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:10.609| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:   6%|#5                          | 8/144 [00:07<01:26,  1.57it/s]|2023-12-15|15:56:10.667| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:10.676| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:10.805| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:10.821| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:11.068| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:11.080| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:11.100| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:11.116| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:11.142| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:   6%|#7                          | 9/144 [00:07<01:22,  1.64it/s]|2023-12-15|15:56:11.216| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:11.224| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:11.305| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:11.321| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:11.602| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:11.613| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:11.625| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:11.634| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:11.678| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:   7%|#8                         | 10/144 [00:08<01:17,  1.72it/s]|2023-12-15|15:56:11.727| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:11.737| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:12.010| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:12.024| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:12.103| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:12.116| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:12.212| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:   8%|##                         | 11/144 [00:08<01:15,  1.76it/s]|2023-12-15|15:56:12.264| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:12.271| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:12.297| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:12.304| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:12.437| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:12.453| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:12.620| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:12.631| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:12.758| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:12.770| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:12.831| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:   8%|##2                        | 12/144 [00:09<01:17,  1.70it/s]|2023-12-15|15:56:12.917| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:12.937| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:13.003| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:13.015| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:13.370| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:13.375| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:13.442| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:13.444| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:13.458| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:   9%|##4                        | 13/144 [00:10<01:17,  1.69it/s]|2023-12-15|15:56:13.507| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:13.513| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:13.741| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:13.755| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:13.927| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:13.934| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:13.941| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:13.965| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:13.987| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  10%|##6                        | 14/144 [00:10<01:15,  1.71it/s]|2023-12-15|15:56:14.067| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:14.080| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:14.142| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:14.149| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:14.372| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:14.379| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:14.459| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:14.472| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:14.553| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  10%|##8                        | 15/144 [00:11<01:13,  1.75it/s]|2023-12-15|15:56:14.608| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:14.615| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:14.698| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:14.712| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:14.888| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:14.902| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:14.950| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:14.964| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:15.083| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  11%|###                        | 16/144 [00:11<01:11,  1.80it/s]|2023-12-15|15:56:15.126| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:15.138| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:15.221| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:15.239| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:15.434| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:15.446| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:15.471| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:15.477| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:15.608| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  12%|###1                       | 17/144 [00:12<01:10,  1.79it/s]|2023-12-15|15:56:15.695| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:15.710| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:15.765| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:15.772| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:16.156| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:16.170| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:16.183| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  12%|###3                       | 18/144 [00:12<01:09,  1.80it/s]|2023-12-15|15:56:16.223| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:16.229| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:16.251| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:16.267| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:16.751| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:16.797| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:16.811| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  13%|###5                       | 19/144 [00:13<01:11,  1.75it/s]|2023-12-15|15:56:16.849| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:16.863| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:16.972| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:16.992| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:17.349| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:17.364| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:17.418| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:17.520| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:17.537| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  14%|###7                       | 20/144 [00:14<01:16,  1.63it/s]|2023-12-15|15:56:17.566| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:17.582| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:17.732| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:17.756| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:18.061| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:18.080| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:18.146| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  15%|###9                       | 21/144 [00:14<01:18,  1.56it/s]|2023-12-15|15:56:18.275| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:18.287| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:18.367| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:18.366| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:18.376| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:18.378| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:18.840| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  15%|####1                      | 22/144 [00:15<01:21,  1.51it/s]|2023-12-15|15:56:19.002| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:19.022| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:19.052| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:19.062| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:19.070| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:19.075| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:19.239| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:19.267| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:19.532| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:19.580| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:19.602| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  16%|####3                      | 23/144 [00:16<01:21,  1.49it/s]|2023-12-15|15:56:19.669| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:19.684| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:19.727| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:19.742| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:19.858| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:19.882| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:20.139| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:20.143| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:20.218| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  17%|####5                      | 24/144 [00:16<01:18,  1.53it/s]|2023-12-15|15:56:20.360| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:20.376| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:20.394| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:20.419| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:20.464| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:20.486| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:20.554| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:20.569| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:20.785| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:20.829| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:20.836| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  17%|####6                      | 25/144 [00:17<01:15,  1.58it/s]|2023-12-15|15:56:20.863| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:20.867| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:20.937| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:20.950| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:21.141| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:21.153| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:21.252| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:21.268| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:21.334| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:21.324| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:21.342| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  18%|####8                      | 26/144 [00:18<01:12,  1.64it/s]|2023-12-15|15:56:21.427| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:21.457| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:21.452| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:21.476| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:21.705| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:21.725| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:21.896| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:21.901| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:21.902| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  19%|#####                      | 27/144 [00:18<01:08,  1.71it/s]|2023-12-15|15:56:21.957| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:21.968| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:22.033| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:22.049| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:22.269| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:22.281| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:22.284| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:22.305| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:22.446| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  19%|#####2                     | 28/144 [00:19<01:07,  1.72it/s]|2023-12-15|15:56:22.526| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:22.524| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:22.532| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:22.534| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:22.590| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:22.608| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:22.883| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:22.885| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:22.890| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:22.892| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:23.001| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  20%|#####4                     | 29/144 [00:19<01:04,  1.78it/s]|2023-12-15|15:56:23.053| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:23.066| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:23.116| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:23.133| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:23.338| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:23.342| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:23.368| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:23.379| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:23.513| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  21%|#####6                     | 30/144 [00:20<01:03,  1.80it/s]|2023-12-15|15:56:23.596| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:23.604| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:23.641| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:23.651| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:23.836| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:23.850| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:23.904| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:23.915| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:24.074| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:24.065| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:24.076| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  22%|#####8                     | 31/144 [00:20<01:03,  1.78it/s]|2023-12-15|15:56:24.153| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:24.168| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:24.282| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:24.296| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:24.491| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:24.503| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:24.623| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  22%|######                     | 32/144 [00:21<01:01,  1.82it/s]|2023-12-15|15:56:24.667| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:24.684| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:24.679| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:24.683| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:24.936| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:24.940| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:24.966| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:24.976| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:25.121| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:25.125| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:25.175| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  23%|######1                    | 33/144 [00:21<01:01,  1.82it/s]|2023-12-15|15:56:25.229| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:25.238| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:25.342| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:25.357| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:25.514| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:25.529| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:25.699| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:25.710| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:25.713| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  24%|######3                    | 34/144 [00:22<00:59,  1.84it/s]|2023-12-15|15:56:25.756| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:25.766| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:25.884| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:25.899| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:25.981| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:25.985| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:26.143| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:26.146| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:26.230| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  24%|######5                    | 35/144 [00:22<00:58,  1.86it/s]|2023-12-15|15:56:26.286| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:26.299| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:26.337| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:26.350| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:26.554| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:26.569| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:26.733| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:26.745| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:26.743| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  25%|######7                    | 36/144 [00:23<00:57,  1.89it/s]|2023-12-15|15:56:26.793| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:26.800| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:27.013| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:27.027| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:27.048| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:27.060| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:27.271| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:27.273| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:27.286| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  26%|######9                    | 37/144 [00:23<00:57,  1.87it/s]|2023-12-15|15:56:27.330| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:27.345| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:27.462| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:27.464| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:27.729| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:27.742| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:27.804| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  26%|#######1                   | 38/144 [00:24<00:56,  1.89it/s]|2023-12-15|15:56:27.844| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:27.855| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:27.924| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:27.939| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:28.122| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:28.139| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:28.165| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:28.174| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:28.326| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  27%|#######3                   | 39/144 [00:24<00:55,  1.90it/s]|2023-12-15|15:56:28.379| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:28.394| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:28.412| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:28.429| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:28.633| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:28.646| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:28.819| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:28.834| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:28.858| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  28%|#######5                   | 40/144 [00:25<00:55,  1.87it/s]|2023-12-15|15:56:28.931| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:28.942| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:29.090| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:29.096| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:29.120| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:29.130| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:29.335| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:29.348| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:29.377| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:29.391| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:29.410| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  28%|#######6                   | 41/144 [00:26<00:55,  1.85it/s]|2023-12-15|15:56:29.497| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:29.511| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:29.637| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:29.647| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:29.768| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:29.781| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:29.965| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:29.982| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:29.986| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  29%|#######8                   | 42/144 [00:26<00:55,  1.84it/s]|2023-12-15|15:56:30.031| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:30.044| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:30.259| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:30.269| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:30.470| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:30.478| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:30.527| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  30%|########                   | 43/144 [00:27<00:56,  1.78it/s]|2023-12-15|15:56:30.646| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:30.654| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:30.878| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:30.886| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:31.176| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  31%|########2                  | 44/144 [00:27<00:58,  1.72it/s]|2023-12-15|15:56:31.255| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:31.263| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:31.267| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:31.273| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:31.375| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:31.389| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:31.807| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:31.866| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:31.880| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  31%|########4                  | 45/144 [00:28<01:00,  1.64it/s]|2023-12-15|15:56:32.001| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:32.009| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:32.115| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:32.138| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:32.350| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:32.363| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:32.500| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:32.562| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:32.575| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  32%|########6                  | 46/144 [00:29<01:01,  1.58it/s]|2023-12-15|15:56:32.629| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:32.641| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:32.821| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:32.845| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:33.163| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:33.170| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:33.182| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  33%|########8                  | 47/144 [00:29<01:02,  1.55it/s]|2023-12-15|15:56:33.274| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:33.296| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:33.298| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:33.325| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:33.466| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:33.482| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:33.871| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:33.882| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:33.901| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  33%|#########                  | 48/144 [00:30<01:03,  1.51it/s]|2023-12-15|15:56:34.001| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:34.013| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:34.031| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:34.039| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:34.248| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:34.265| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:34.393| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:34.405| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:34.537| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  34%|#########1                 | 49/144 [00:31<01:02,  1.53it/s]|2023-12-15|15:56:34.640| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:34.656| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:34.755| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:34.757| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:34.769| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:34.772| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:34.963| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:34.975| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:35.115| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:35.132| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:35.146| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  35%|#########3                 | 50/144 [00:31<00:59,  1.59it/s]|2023-12-15|15:56:35.204| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:35.221| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:35.271| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:35.284| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:35.448| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:35.461| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:35.623| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:35.638| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:35.669| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:35.680| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:35.716| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  35%|#########5                 | 51/144 [00:32<00:57,  1.62it/s]|2023-12-15|15:56:35.784| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:35.799| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:36.020| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:36.030| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:36.090| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:36.106| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:36.273| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:36.295| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:36.288| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  36%|#########7                 | 52/144 [00:32<00:55,  1.65it/s]|2023-12-15|15:56:36.374| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:36.384| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:36.459| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:36.476| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:36.504| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:36.520| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:36.746| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:36.765| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:36.794| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:36.812| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:36.873| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  37%|#########9                 | 53/144 [00:33<00:53,  1.69it/s]|2023-12-15|15:56:36.939| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:36.959| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:37.027| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:37.043| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:37.239| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:37.251| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:37.328| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:37.340| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:37.421| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:37.454| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  38%|##########1                | 54/144 [00:34<00:52,  1.72it/s]|2023-12-15|15:56:37.467| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:37.492| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:37.508| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:37.737| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:37.750| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:37.862| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:37.871| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:38.003| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  38%|##########3                | 55/144 [00:34<00:51,  1.72it/s]|2023-12-15|15:56:38.078| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:38.085| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:38.135| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:38.151| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:38.375| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:38.377| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:38.444| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:38.462| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:38.574| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  39%|##########5                | 56/144 [00:35<00:51,  1.71it/s]|2023-12-15|15:56:38.635| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:38.654| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:38.666| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:38.681| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:38.822| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:38.824| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:39.060| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:39.075| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:39.134| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  40%|##########6                | 57/144 [00:35<00:49,  1.76it/s]|2023-12-15|15:56:39.191| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:39.207| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:39.334| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:39.348| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:39.535| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:39.538| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:39.635| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:39.647| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:39.696| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:39.696| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:39.701| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  40%|##########8                | 58/144 [00:36<00:49,  1.74it/s]|2023-12-15|15:56:39.781| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:39.788| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:39.949| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:39.966| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:40.099| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:40.107| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:40.252| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:40.265| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:40.277| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  41%|###########                | 59/144 [00:36<00:48,  1.77it/s]|2023-12-15|15:56:40.331| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:40.344| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:40.468| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:40.477| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:40.604| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:40.617| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:40.800| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  42%|###########2               | 60/144 [00:37<00:46,  1.80it/s]|2023-12-15|15:56:40.864| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:40.866| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:40.868| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:40.875| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:41.127| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:41.143| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:41.143| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:41.174| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:41.300| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:41.311| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:41.340| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  42%|###########4               | 61/144 [00:37<00:46,  1.79it/s]|2023-12-15|15:56:41.419| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:41.433| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:41.539| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:41.548| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:41.810| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:41.819| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:41.910| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  43%|###########6               | 62/144 [00:38<00:45,  1.81it/s]|2023-12-15|15:56:41.958| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:41.970| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:41.996| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:42.009| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:42.253| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:42.258| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:42.303| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:42.317| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:42.422| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  44%|###########8               | 63/144 [00:39<00:43,  1.85it/s]|2023-12-15|15:56:42.478| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:42.487| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:42.566| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:42.574| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:42.826| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:42.838| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:42.874| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:42.893| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:42.985| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  44%|############               | 64/144 [00:39<00:43,  1.83it/s]|2023-12-15|15:56:43.041| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:43.038| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:43.049| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:43.047| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:43.285| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:43.297| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:43.355| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:43.365| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:43.560| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:43.564| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:43.566| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  45%|############1              | 65/144 [00:40<00:44,  1.79it/s]|2023-12-15|15:56:43.620| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:43.634| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:43.837| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:43.858| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:43.850| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:43.864| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:44.070| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:44.077| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:44.101| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  46%|############3              | 66/144 [00:40<00:43,  1.81it/s]|2023-12-15|15:56:44.171| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:44.181| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:44.311| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:44.323| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:44.421| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:44.431| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:44.656| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  47%|############5              | 67/144 [00:41<00:43,  1.79it/s]|2023-12-15|15:56:44.721| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:44.738| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:44.740| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:44.749| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:45.126| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:45.140| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:45.258| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:45.264| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:45.267| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  47%|############7              | 68/144 [00:41<00:44,  1.71it/s]|2023-12-15|15:56:45.412| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:45.429| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:45.736| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:45.751| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:45.920| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  48%|############9              | 69/144 [00:42<00:45,  1.66it/s]|2023-12-15|15:56:46.010| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:46.031| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:46.050| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:46.065| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:46.155| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:46.170| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:46.541| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:46.565| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:46.617| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  49%|#############1             | 70/144 [00:43<00:46,  1.60it/s]|2023-12-15|15:56:46.710| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:46.736| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:46.846| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:46.863| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:47.044| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:47.063| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:47.233| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:47.250| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:47.279| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:47.367| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  49%|#############3             | 71/144 [00:43<00:47,  1.54it/s]|2023-12-15|15:56:47.382| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:47.405| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:47.412| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:47.912| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:47.934| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:47.976| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:47.984| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:48.011| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  50%|#############5             | 72/144 [00:44<00:47,  1.50it/s]|2023-12-15|15:56:48.120| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:48.151| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:48.245| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:48.264| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:48.490| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:48.517| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:48.668| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:48.750| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  51%|#############6             | 73/144 [00:45<00:47,  1.50it/s]|2023-12-15|15:56:48.762| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:48.778| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:48.819| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:48.981| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:48.995| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:49.329| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:49.356| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:49.375| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  51%|#############8             | 74/144 [00:45<00:45,  1.52it/s]|2023-12-15|15:56:49.415| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:49.427| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:49.499| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:49.509| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:49.565| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:49.585| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:49.871| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:49.891| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:49.925| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:49.933| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:49.964| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  52%|##############             | 75/144 [00:46<00:44,  1.55it/s]|2023-12-15|15:56:50.001| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:50.022| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:50.023| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:50.030| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:50.278| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:50.301| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:50.435| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:50.452| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:50.466| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:50.487| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:50.553| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  53%|##############2            | 76/144 [00:47<00:42,  1.58it/s]|2023-12-15|15:56:50.637| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:50.651| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:50.697| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:50.706| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:50.837| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:50.852| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:51.025| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:51.037| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:51.132| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:51.131| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:51.150| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  53%|##############4            | 77/144 [00:47<00:41,  1.63it/s]|2023-12-15|15:56:51.206| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:51.226| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:51.268| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:51.289| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:51.594| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:51.599| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:51.608| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:51.610| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:51.702| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  54%|##############6            | 78/144 [00:48<00:39,  1.66it/s]|2023-12-15|15:56:51.783| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:51.794| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:51.863| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:51.871| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:52.145| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:52.154| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:52.210| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:52.225| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:52.294| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  55%|##############8            | 79/144 [00:48<00:38,  1.69it/s]|2023-12-15|15:56:52.340| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:52.357| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:52.503| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:52.515| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:52.701| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:52.713| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:52.811| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:52.821| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:52.829| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  56%|###############            | 80/144 [00:49<00:37,  1.72it/s]|2023-12-15|15:56:52.895| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:52.918| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:53.034| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:53.050| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:53.267| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:53.280| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:53.368| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:53.381| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:53.379| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  56%|###############1           | 81/144 [00:50<00:35,  1.76it/s]|2023-12-15|15:56:53.442| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:53.454| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:53.642| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:53.661| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:53.852| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:53.873| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:53.900| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:53.912| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:53.942| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  57%|###############3           | 82/144 [00:50<00:35,  1.76it/s]|2023-12-15|15:56:54.010| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:54.025| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:54.209| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:54.224| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:54.340| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:54.358| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:54.501| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:54.526| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:54.515| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  58%|###############5           | 83/144 [00:51<00:35,  1.74it/s]|2023-12-15|15:56:54.600| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:54.625| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:54.644| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:54.662| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:54.933| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:54.954| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:55.035| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:55.049| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:55.088| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  58%|###############7           | 84/144 [00:51<00:33,  1.77it/s]|2023-12-15|15:56:55.136| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:55.139| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:55.277| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:55.295| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:55.529| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:55.531| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:55.577| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:55.587| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:55.628| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  59%|###############9           | 85/144 [00:52<00:33,  1.78it/s]|2023-12-15|15:56:55.691| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:55.703| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:55.802| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:55.810| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:56.060| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:56.069| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:56.114| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:56.128| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:56.176| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  60%|################1          | 86/144 [00:52<00:32,  1.79it/s]|2023-12-15|15:56:56.251| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:56.265| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:56.334| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:56.350| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:56.545| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:56.561| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:56.713| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:56.728| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:56.763| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  60%|################3          | 87/144 [00:53<00:32,  1.76it/s]|2023-12-15|15:56:56.840| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:56.849| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:57.008| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:57.024| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:57.113| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:57.116| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:57.306| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:57.321| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:57.343| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  61%|################5          | 88/144 [00:53<00:31,  1.75it/s]|2023-12-15|15:56:57.389| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:57.404| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:57.424| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:57.433| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:57.688| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:57.691| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:57.751| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:57.768| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:57.887| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  62%|################6          | 89/144 [00:54<00:30,  1.80it/s]|2023-12-15|15:56:57.932| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:57.947| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:57.995| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:58.008| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:58.233| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:58.245| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:58.307| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:58.316| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:58.447| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  62%|################8          | 90/144 [00:55<00:30,  1.77it/s]|2023-12-15|15:56:58.527| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:58.538| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:58.560| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:58.572| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:58.851| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:58.853| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:58.859| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:58.865| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:59.033| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:59.078| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  63%|#################          | 91/144 [00:55<00:30,  1.75it/s]|2023-12-15|15:56:59.102| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:59.113| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:59.123| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:59.454| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:59.456| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:59.465| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:59.468| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:59.611| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  64%|#################2         | 92/144 [00:56<00:30,  1.72it/s]|2023-12-15|15:56:59.727| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:59.743| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:59.827| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:56:59.843| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:00.251| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:00.273| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:00.283| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:00.329| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  65%|#################4         | 93/144 [00:56<00:30,  1.67it/s]|2023-12-15|15:57:00.331| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:00.374| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:00.393| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:00.906| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:00.925| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:00.947| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  65%|#################6         | 94/144 [00:57<00:31,  1.60it/s]|2023-12-15|15:57:01.047| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:01.060| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:01.188| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:01.202| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:01.467| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:01.478| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:01.589| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:01.584| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:01.598| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:01.664| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:01.677| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  66%|#################8         | 95/144 [00:58<00:31,  1.55it/s]|2023-12-15|15:57:01.736| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:01.756| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:02.112| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:02.136| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:02.273| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:02.304| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:02.298| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  67%|##################         | 96/144 [00:59<00:31,  1.51it/s]|2023-12-15|15:57:02.437| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:02.458| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:02.554| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:02.569| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:02.741| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:02.765| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:02.987| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  67%|##################1        | 97/144 [00:59<00:31,  1.49it/s]|2023-12-15|15:57:03.157| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:03.167| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:03.194| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:03.211| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:03.402| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:03.422| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:03.684| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:03.764| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:03.780| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  68%|##################3        | 98/144 [01:00<00:31,  1.48it/s]|2023-12-15|15:57:03.824| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:03.839| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:03.987| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:04.004| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:04.038| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:04.055| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:04.213| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:04.223| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:04.384| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  69%|##################5        | 99/144 [01:01<00:30,  1.50it/s]|2023-12-15|15:57:04.499| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:04.497| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:04.507| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:04.513| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:04.539| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:04.555| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:04.561| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:04.577| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:04.864| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:04.886| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:05.009| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:05.030| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:05.043| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  69%|##################        | 100/144 [01:01<00:29,  1.51it/s]|2023-12-15|15:57:05.124| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:05.144| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:05.178| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:05.198| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:05.516| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:05.525| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:05.574| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:05.590| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:05.626| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  70%|##################2       | 101/144 [01:02<00:27,  1.58it/s]|2023-12-15|15:57:05.688| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:05.696| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:05.876| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:05.893| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:05.981| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:05.998| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:06.093| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:06.113| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:06.196| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:06.207| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:06.218| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  71%|##################4       | 102/144 [01:02<00:26,  1.60it/s]|2023-12-15|15:57:06.287| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:06.301| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:06.420| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:06.437| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:06.707| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:06.724| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:06.721| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:06.732| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:06.802| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  72%|##################5       | 103/144 [01:03<00:25,  1.63it/s]|2023-12-15|15:57:06.888| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:06.905| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:07.063| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:07.086| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:07.232| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:07.245| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:07.395| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:07.397| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:07.421| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  72%|##################7       | 104/144 [01:04<00:24,  1.64it/s]|2023-12-15|15:57:07.488| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:07.496| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:07.498| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:07.516| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:07.762| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:07.776| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:07.933| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:07.946| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:07.976| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  73%|##################9       | 105/144 [01:04<00:23,  1.69it/s]|2023-12-15|15:57:08.037| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:08.058| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:08.284| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:08.301| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:08.346| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:08.361| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:08.499| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:08.512| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:08.552| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:08.584| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  74%|###################1      | 106/144 [01:05<00:22,  1.69it/s]|2023-12-15|15:57:08.599| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:08.620| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:08.626| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:08.871| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:08.879| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:08.926| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:08.940| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:09.124| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:09.141| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:09.153| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  74%|###################3      | 107/144 [01:05<00:21,  1.72it/s]|2023-12-15|15:57:09.186| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:09.191| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:09.415| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:09.428| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:09.522| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:09.540| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:09.659| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  75%|###################5      | 108/144 [01:06<00:20,  1.74it/s]|2023-12-15|15:57:09.745| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:09.757| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:09.819| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:09.827| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:10.061| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:10.062| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:10.071| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:10.075| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:10.256| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  76%|###################6      | 109/144 [01:06<00:20,  1.73it/s]|2023-12-15|15:57:10.298| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:10.320| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:10.339| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:10.343| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:10.494| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:10.512| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:10.731| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:10.747| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:10.853| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  76%|###################8      | 110/144 [01:07<00:19,  1.73it/s]|2023-12-15|15:57:10.898| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:10.915| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:10.986| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:11.002| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:11.186| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:11.200| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:11.363| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:11.373| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:11.384| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  77%|####################      | 111/144 [01:08<00:18,  1.76it/s]|2023-12-15|15:57:11.433| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:11.457| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:11.586| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:11.601| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:11.796| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:11.810| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:11.852| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:11.866| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:11.949| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  78%|####################2     | 112/144 [01:08<00:18,  1.75it/s]|2023-12-15|15:57:12.019| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:12.033| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:12.186| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:12.204| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:12.316| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:12.334| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:12.485| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:12.502| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:12.527| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  78%|####################4     | 113/144 [01:09<00:17,  1.75it/s]|2023-12-15|15:57:12.614| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:12.629| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:12.651| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:12.673| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:12.874| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:12.882| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:13.060| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:13.074| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:13.114| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  79%|####################5     | 114/144 [01:09<00:17,  1.74it/s]|2023-12-15|15:57:13.176| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:13.184| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:13.324| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:13.338| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:13.483| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:13.495| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:13.577| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:13.590| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:13.680| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:13.700| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:13.709| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  80%|####################7     | 115/144 [01:10<00:16,  1.75it/s]|2023-12-15|15:57:13.750| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:13.758| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:14.059| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:14.080| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:14.192| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:14.202| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:14.261| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  81%|####################9     | 116/144 [01:10<00:16,  1.71it/s]|2023-12-15|15:57:14.357| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:14.366| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:14.616| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:14.633| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:14.895| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:14.932| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  81%|#####################1    | 117/144 [01:11<00:16,  1.67it/s]|2023-12-15|15:57:14.949| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:14.990| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:15.004| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:15.082| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:15.095| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:15.456| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:15.468| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:15.547| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  82%|#####################3    | 118/144 [01:12<00:16,  1.62it/s]|2023-12-15|15:57:15.653| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:15.668| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:15.745| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:15.762| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:16.017| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:16.035| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:16.206| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:16.221| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:16.247| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:16.304| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:16.317| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  83%|#####################4    | 119/144 [01:12<00:16,  1.54it/s]|2023-12-15|15:57:16.375| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:16.391| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:16.799| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:16.814| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:16.893| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:16.926| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:16.927| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  83%|#####################6    | 120/144 [01:13<00:15,  1.52it/s]|2023-12-15|15:57:17.064| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:17.080| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:17.202| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:17.216| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:17.309| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:17.325| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:17.646| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:17.708| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:17.733| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  84%|#####################8    | 121/144 [01:14<00:15,  1.46it/s]|2023-12-15|15:57:17.810| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:17.833| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:17.936| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:17.958| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:18.224| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:18.238| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:18.365| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  85%|######################    | 122/144 [01:15<00:15,  1.46it/s]|2023-12-15|15:57:18.506| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:18.516| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:18.599| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:18.614| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:18.772| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:18.786| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:19.049| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  85%|######################2   | 123/144 [01:15<00:14,  1.47it/s]|2023-12-15|15:57:19.169| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:19.178| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:19.243| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:19.253| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:19.275| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:19.279| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:19.375| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:19.393| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:19.608| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:19.618| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:19.719| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  86%|######################3   | 124/144 [01:16<00:13,  1.49it/s]|2023-12-15|15:57:19.805| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:19.813| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:19.808| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:19.827| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:19.870| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:19.880| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:19.957| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:19.964| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:20.282| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:20.298| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:20.333| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:20.359| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:20.355| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  87%|######################5   | 125/144 [01:17<00:12,  1.51it/s]|2023-12-15|15:57:20.443| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:20.462| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:20.632| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:20.653| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:20.678| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:20.691| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:20.930| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  88%|######################7   | 126/144 [01:17<00:11,  1.60it/s]|2023-12-15|15:57:21.010| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:21.012| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:21.017| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:21.020| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:21.033| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:21.025| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:21.357| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:21.378| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:21.445| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:21.463| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:21.477| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  88%|######################9   | 127/144 [01:18<00:10,  1.66it/s]|2023-12-15|15:57:21.527| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:21.542| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:21.726| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:21.739| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:21.824| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:21.836| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:22.074| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:22.109| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:22.103| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  89%|#######################1  | 128/144 [01:18<00:09,  1.65it/s]|2023-12-15|15:57:22.128| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:22.131| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:22.145| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:22.148| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:22.496| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:22.511| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:22.571| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:22.582| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:22.692| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  90%|#######################2  | 129/144 [01:19<00:09,  1.65it/s]|2023-12-15|15:57:22.750| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:22.760| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:22.764| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:22.789| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:22.922| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:22.939| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:23.242| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:23.257| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:23.261| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:23.284| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:23.291| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  90%|#######################4  | 130/144 [01:19<00:08,  1.66it/s]|2023-12-15|15:57:23.338| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:23.356| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:23.504| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:23.526| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:23.610| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:23.618| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:23.799| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:23.807| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:23.808| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:23.835| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:23.817| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  91%|#######################6  | 131/144 [01:20<00:07,  1.68it/s]|2023-12-15|15:57:23.928| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:23.939| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:24.009| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:24.037| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:24.207| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:24.220| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:24.320| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:24.326| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:24.416| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:24.433| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:24.435| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  92%|#######################8  | 132/144 [01:21<00:06,  1.72it/s]|2023-12-15|15:57:24.470| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:24.481| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:24.708| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:24.714| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:24.806| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:24.812| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:24.921| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:24.923| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:24.984| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  92%|########################  | 133/144 [01:21<00:06,  1.74it/s]|2023-12-15|15:57:25.046| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:25.058| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:25.207| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:25.210| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:25.312| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:25.322| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:25.411| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:25.421| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:25.528| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  93%|########################1 | 134/144 [01:22<00:05,  1.77it/s]|2023-12-15|15:57:25.565| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:25.579| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:25.736| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:25.744| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:25.832| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:25.842| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:25.941| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:25.943| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:26.041| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  94%|########################3 | 135/144 [01:22<00:04,  1.81it/s]|2023-12-15|15:57:26.092| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:26.098| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:26.244| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:26.256| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:26.343| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:26.346| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:26.434| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:26.436| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
|2023-12-15|15:57:26.567| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  94%|########################5 | 136/144 [01:23<00:04,  1.85it/s]|2023-12-15|15:57:27.085| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  95%|########################7 | 137/144 [01:23<00:03,  1.88it/s]|2023-12-15|15:57:27.592| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  96%|########################9 | 138/144 [01:24<00:03,  1.90it/s]|2023-12-15|15:57:28.095| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  97%|######################### | 139/144 [01:24<00:02,  1.93it/s]|2023-12-15|15:57:28.603| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  97%|#########################2| 140/144 [01:25<00:02,  1.94it/s]|2023-12-15|15:57:29.108| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  98%|#########################4| 141/144 [01:25<00:01,  1.95it/s]|2023-12-15|15:57:29.616| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  99%|#########################6| 142/144 [01:26<00:01,  1.94it/s]|2023-12-15|15:57:30.142| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch:  99%|#########################8| 143/144 [01:26<00:00,  1.94it/s]|2023-12-15|15:57:30.649| [WARNING] Read: Scale > 1.This means that the desired resolution is higher than the WSI baseline (maximum encoded resolution). Interpolation of read regions may occur.
Process Batch: 100%|##########################| 144/144 [01:27<00:00,  1.65it/s]

|2023-12-15|15:57:30.689| [INFO] Finish: 0
|2023-12-15|15:57:30.690| [INFO] --Input: sample_wsi.svs
|2023-12-15|15:57:30.692| [INFO] --Output: /content/sample_wsi_results/0

Note the only differences made here are:

1. Adding auto_generate_mask=False to the SemanticSegmentor. If True, the toolbox automatically extracts tissue masks from WSIs if there is no masks input is provided to the predict function.

2. Setting mode='wsi' in the predict function indicates that we are predicting region segmentations for inputs in the form of WSIs.

3. masks=None in the predict function: masks argument similar to the imgs should be a list of paths to the desired image masks. Patches from imgs are only processed if they are within a masked area of their corresponding masks. If not provided (masks=None), then a tissue mask will be automatically generated for whole-slide images or the entire image is processed for image tiles.

The above cell might take a while to process, especially if you have set ON_GPU=False. The processing time depends on the size of the input WSI and the selected resolution. Here, we have not specified any values, which means that the baseline resolution of the WSI, which is 40x in this example, will be used.

logger.info(
    "Prediction method output is: %s, %s",
    wsi_output[0][0],
    wsi_output[0][1],
)
wsi_prediction_raw = np.load(
    wsi_output[0][1] + ".raw.0.npy",
)  # Loading the first prediction [0] based on the output address [1]
logger.info(
    "Raw prediction dimensions: (%d, %d, %d)",
    wsi_prediction_raw.shape[0],
    wsi_prediction_raw.shape[1],
    wsi_prediction_raw.shape[2],
)

# Simple processing of the raw prediction to generate semantic segmentation task
wsi_prediction = np.argmax(
    wsi_prediction_raw,
    axis=-1,
)  # select the class with highest probability
logger.info(
    "Processed prediction dimensions: (%d, %d)",
    wsi_prediction.shape[0],
    wsi_prediction.shape[1],
)

# [WSI overview extraction]
# Now reading the WSI to extract it's overview
wsi = WSIReader.open(wsi_file_name)
logger.info(
    "WSI original dimensions: (%d, %d)",
    wsi.info.slide_dimensions[0],
    wsi.info.slide_dimensions[1],
)

# using the prediction save_resolution to create the wsi overview at the same resolution
overview_info = bcc_wsi_ioconfig.save_resolution

# extracting slide overview using `slide_thumbnail` method
wsi_overview = wsi.slide_thumbnail(
    resolution=overview_info["resolution"],
    units=overview_info["units"],
)
logger.info(
    "WSI overview dimensions: (%d, %d)",
    wsi_overview.shape[0],
    wsi_overview.shape[1],
)
plt.figure(), plt.imshow(wsi_overview)
plt.axis("off")

# [Overlay map creation]
# creating label-color dictionary to be fed into `overlay_prediction_mask` function
# to help generating color legend
label_dict = {"Tumour": 0, "Stroma": 1, "Inflamatory": 2, "Necrosis": 3, "Others": 4}
label_color_dict = {}
colors = cm.get_cmap("Set1").colors
for class_name, label in label_dict.items():
    label_color_dict[label] = (class_name, 255 * np.array(colors[label]))
# Creat overlay map using the `overlay_prediction_mask` helper function
overlay = overlay_prediction_mask(
    wsi_overview,
    wsi_prediction,
    alpha=0.5,
    label_info=label_color_dict,
    return_ax=True,
)

|2023-12-15|16:09:38.558| [INFO] Prediction method output is: sample_wsi.svs, /content/sample_wsi_results/0
|2023-12-15|16:09:38.608| [INFO] Raw prediction dimensions: (1503, 1503, 5)
|2023-12-15|16:09:38.673| [INFO] Processed prediction dimensions: (1503, 1503)
|2023-12-15|16:09:38.699| [INFO] WSI original dimensions: (12000, 12000)
|2023-12-15|16:09:39.715| [INFO] WSI overview dimensions: (1503, 1503)

As you can see above, we first post-process the prediction map, the same way as we did for tiles (taking argmax of the model output), to create the semantic segmentation map. Then, in order to visualise the segmentation prediction on the tissue image, we read the processed WSI and extract its overview. Please note that the overview is extracted at the same resolution as the saved prediction output (accessed through bcc_wsi_ioconfig.save_resolution). Finally, we used the overlay_prediction_mask helper function of the TIAToolbox to overlay the prediction map on the overview image and depict it with a colour legend.

In summary, it is very easy to use pretrained models in the TIAToolbox to do predefined tasks. In fact, you don’t even need to set any parameters related to a model’s input/output when you decide to work with one of TIAToolbox’s pretrained models (they will be set automatically, based on their optimal values). Here we explain how the parameters work, so we need to show them explicitly. In other words, region segmentation in images can be done as easily as:

segmentor = SemanticSegmentor(pretrained_model="fcn_resnet50_unet-bcss" num_loader_workers=4, batch_size=4)
output = segmentor.predict([img_file_name], save_dir="sample_tile_results/", mode="tile")

Having said that, you may need to take care of a couple of other things if you want to use the same model with new weights, or even use a whole new model in the TIAToolbox inference pipeline. But don’t worry, these will be covered in the next section of this notebook.

Semantic segmentation using user-trained (external) models

At the TIACentre we are extending the number of pretrained models in the toolbox as fast as we can, to cover more tasks and tissue types. Nevertheless, users may need to use their own models in the TIAToolbox inference pipeline. In this case, TIAToolbox removes the burden of programing WSI processing, patch extraction, prediction aggregation, and multi-processing handling. Projects at scale provide further complications. But TIAToolbox comes to the rescue! TIAToolbox supports Pytorch models. It’s very easy to fit torch models in theTIAToolbox inference pipeline. We show you how.

Tissue segmentation model as an external model

We have a model that has been trained for tissue mask segmentation i.e., a PyTorch model that has been trained to distinguish between tissue and background, and we want to use it for tissue mask generation (instead of using a simple thresholding technique like Otsu’s method).

The first thing to do is to prepare our model. As an illustration of the technique, we use a generic UNet architecture that already been implemented in the TIAToolbox. The section “Downloading the required files” above describes downloading the weights pretrained for segmentation, and these are loaded into the model.

# define model architecture
external_model = UNetModel(
    num_input_channels=3,  # number of input image channels (3 for RGB)
    # number of model's output channels. 2 for two classes foreground and background.
    num_output_channels=2,
    # model used in the encoder part of the model to extract features
    encoder="resnet50",
    decoder_block=[
        3,
    ],  #  A list of convolution layers (each item specifies the kernel size)
)

# Loading pretrained weights into the model
map_location = torch.device("cuda") if ON_GPU else torch.device("cpu")
pretrained_weights = torch.load(model_file_name, map_location=torch.device("cpu"))
external_model.load_state_dict(pretrained_weights)

<All keys matched successfully>

This is just an example, and you can use any CNN model of your choice. Remember that, in order to use SemanticSegmentor, model weights should already be loaded: when you pass a model argument to SemanticSegmentor, the latter ignores the pretrained_model and pretrained_weights arguments. In other words, the argument pretrained_weights is associated with the argument pretrained_model and not with the argument model.

Now that we have our model in place, let’s create our SemanticSegmentor. Also, we need to configure the Input/Output stream of data for our model using IOSegmentorConfig.

tissue_segmentor = SemanticSegmentor(
    model=external_model,
    num_loader_workers=4,
    batch_size=4,
)

# define the I/O configurations for tissue segmentation model
tissue_segmentor_ioconfig = IOSegmentorConfig(
    input_resolutions=[{"units": "mpp", "resolution": 2.0}],
    output_resolutions=[{"units": "mpp", "resolution": 2.0}],
    patch_input_shape=[1024, 1024],
    patch_output_shape=[512, 512],
    stride_shape=[512, 512],
    save_resolution={"units": "mpp", "resolution": 8.0},
)

Now, everything is in place to start the prediction using the defined tissue_segmentor on how many input images we like:

tissue_mask_output = tissue_segmentor.predict(
    [mini_wsi_file_name],
    mode="wsi",
    on_gpu=ON_GPU,
    ioconfig=tissue_segmentor_ioconfig,
    save_dir="tissue_mask_results/",
)

Show code cell output Hide code cell output

Process Batch: 100%|############################| 98/98 [01:21<00:00,  1.20it/s]

|2023-12-15|16:14:39.729| [INFO] Finish: 0
|2023-12-15|16:14:39.734| [INFO] --Input: mini_wsi.svs
|2023-12-15|16:14:39.735| [INFO] --Output: /content/tissue_mask_results/0

If everything has gone well, tissue_segmentor should have been able to use our external model to do prediction on a whole slide image. Let’s see how well our model worked:

# [Loading the raw prediction]
logger.info(
    "Prediction method output is: %s, %s",
    tissue_mask_output[0][0],
    tissue_mask_output[0][1],
)
mini_wsi_prediction_raw = np.load(
    tissue_mask_output[0][1] + ".raw.0.npy",
)  # Loading the first prediction [0] based on the output address [1]
logger.info(
    "Raw prediction dimensions: (%d, %d, %d)",
    mini_wsi_prediction_raw.shape[0],
    mini_wsi_prediction_raw.shape[1],
    mini_wsi_prediction_raw.shape[2],
)

# Simple processing of the raw prediction
# to generate semantic segmentation task
mini_wsi_prediction = np.argmax(
    mini_wsi_prediction_raw,
    axis=-1,
)  # select the class with highest probability
logger.info(
    "Processed prediction dimensions: (%d, %d)",
    mini_wsi_prediction.shape[0],
    mini_wsi_prediction.shape[1],
)

# [WSI overview extraction]
# Now reading the WSI to extract it's overview
mini_wsi = WSIReader.open(mini_wsi_file_name)
logger.info(
    "WSI original dimensions: (%d, %d)",
    mini_wsi.info.level_dimensions[0][0],
    mini_wsi.info.level_dimensions[0][1],
)

# using the prediction save_resolution
# to create the wsi overview at the same resolution
overview_info = {"units": "mpp", "resolution": 8.0}  # same as save_resolution

# extracting slide overview using `slide_thumbnail` method
mini_wsi_overview = mini_wsi.slide_thumbnail(
    resolution=overview_info["resolution"],
    units=overview_info["units"],
)
logger.info(
    "WSI overview dimensions: (%d, %d)",
    mini_wsi_prediction.shape[0],
    mini_wsi_prediction.shape[1],
)

ax = plt.subplot(1, 2, 1), plt.imshow(mini_wsi_overview)
plt.axis("off")
ax = plt.subplot(1, 2, 2), plt.imshow(mini_wsi_prediction)
plt.axis("off")

|2023-12-15|16:14:39.874| [INFO] Prediction method output is: mini_wsi.svs, /content/tissue_mask_results/0
|2023-12-15|16:14:39.898| [INFO] Raw prediction dimensions: (2170, 2921, 2)
|2023-12-15|16:14:39.959| [INFO] Processed prediction dimensions: (2170, 2921)
|2023-12-15|16:14:39.967| [INFO] WSI original dimensions: (51200, 38144)
|2023-12-15|16:14:40.645| [INFO] WSI overview dimensions: (2170, 2921)

(-0.5, 2920.5, 2169.5, -0.5)

And that’s it!

To once again see how easy it is to use an external model in TIAToolbox’s semantic segmentation class, we summarize in pseudo-code, as below:

# 1- Define the Pytorch model and load weights
model = get_CNN()
model.load_state_dict(pretrained_weights)

# 2- Define the segmentor and IOconfig
segmentor = SemanticSegmentor(model)
ioconfig = IOSegmentorConfig(...)

# 3- Run the prediction
output = tissue_segmentor.predict([img_paths], save_dir, ioconfig, ...)

Feel free to play around with the parameters, models, and experimenting with new images (just remember to run the first cell of this notebook again, so the created folders for the current examples would be removed or alternatively change the save_dir parameters in new calls of predict function). Currently, we are extending our collection of pre-trained models. To keep a track of them, make sure to follow our releases. You can also check here. Furthermore, if you want to use your own pretrained model for semantic segmentation (or any other pixel-wise prediction models) in the TIAToolbox framework, you can follow the instructions in our example notebook on advanced model techniques to gain some insights and guidance. We welcome any trained model in computational pathology (in any task) for addition to TIAToolbox. If you have such a model (in Pytorch) and want to contribute, please contact us or simply create a PR on our GitHub page.