cli¶
Console script for tiatoolbox.
Functions
Return a string with tiatoolbox package version and python version. |
Define common code required for cli. |
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Process an image/directory of input images with a patch classification CNN. |
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Process an image/directory of input images with a patch classification CNN. |
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Read a region in a whole slide image as specified. |
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Display or save WSI metadata. |
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Process an image/directory of input images with a patch classification CNN. |
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Show a slide together with any overlays. |
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Displays or saves WSI metadata depending on the mode argument. |
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Reads whole slide image thumbnail and shows or saves based on mode argument. |
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Stain normalize an input image/directory of input images. |
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Generate tissue mask for a WSI. |
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Launches the visualization tool for the given directory(s). |