common¶

Define common code required for cli.

Functions

add_default_to_usage_help

Adds default value to usage help string.

cli_auto_generate_mask

Enables --auto-generate-mask option for cli.

cli_batch_size

Enables --batch-size option for cli.

cli_file_type

Enables --file-types option for cli.

cli_img_input

Enables --img-input option for cli.

cli_masks

Enables --masks option for cli.

cli_merge_predictions

Enables --merge-predictions option for cli.

cli_method

Enables --method option for cli.

cli_mode

Enables --mode option for cli.

cli_name

Enable --name option for cli.

cli_num_loader_workers

Enables --num-loader-workers option for cli.

cli_num_postproc_workers

Enables --num-postproc-workers option for cli.

cli_on_gpu

Enables --on-gpu option for cli.

cli_output_path

Enables --output-path option for cli.

cli_pretrained_model

Enables --pretrained-model option for cli.

cli_pretrained_weights

Enables --pretrained-weights option for cli.

cli_region

Enables --region option for cli.

cli_resolution

Enables --resolution option for cli.

cli_return_labels

Enables --return-labels option for cli.

cli_return_probabilities

Enables --return-probabilities option for cli.

cli_tile_format

Enables --tile-format option for cli.

cli_tile_objective

Enables --tile-objective-value option for cli.

cli_tile_read_size

Enables --tile-read-size option for cli.

cli_units

Enables --units option for cli.

cli_verbose

Enables --verbose option for cli.

cli_yaml_config_path

Enables --yaml-config-path option for cli.

no_input_message

This function is called if no input is provided.

prepare_file_dir_cli

Prepares CLI for running code on multiple files or a directory.

prepare_ioconfig_seg

Prepare ioconfig for segmentation.

prepare_model_cli

Prepares cli for running models.

Classes

TIAToolboxCLI

Define TIAToolbox Commandline Interface Click group.