ngff¶

Generation of metadata for the OME-NGFF (zarr) slides.

Borrowed from https://github.com/John-P/wsic

Based on version 0.4 of the specification: https://ngff.openmicroscopy.org/0.4/

Classes

Axis

Description of an axis including type and units.

Channel

Description of a single channel.

CoordinateTransform

Transformation from the zarr to slide coordinate system.

Creator

Record the creator (wsic) information.

Dataset

Description of a single resolution.

Multiscales

Description of multiple resolutions present.

Omero

Display information e.g. colour channel information.

RDefs

Defaults for axes and colour model.

Window

The range of values within a channel.

Zattrs

Root metadata.