tools¶

This package contains various tools for working with WSIs.

tiatoolbox.tools.graph

Construction and visualisation of graphs for WSI prediction.

tiatoolbox.tools.patchextraction

This file defines patch extraction methods for deep learning models.

tiatoolbox.tools.pyramid

Tile pyramid generation in standard formats.

tiatoolbox.tools.registration

Models package for the models implemented in tiatoolbox.

tiatoolbox.tools.stainaugment

Stain augmentation.

tiatoolbox.tools.stainextract

Stain matrix extraction for stain normalization.

tiatoolbox.tools.stainnorm

Stain normalization classes.

tiatoolbox.tools.tissuemask

Methods of masking tissue and background.