remove_padded_values_in_contours

tiatoolbox . utils . misc . remove_padded_values_in_contours

remove_padded_values_in_contours(inst_dict)

Removes padded contour values.

This function removes padded contour values introduced for compatibility with Zarr v3. Zarr v3 does not support “object” dtype which was used to wrap inhomogeneous arrays while saving using Zarr v2. To process contours, the contours are saved as rectangular arrays with padded dtype min values.

Parameters:

inst_dict (dict) – Output of MultiTaskSegmentor Engine.

Returns:

Returns a copy of inst_dict with padded values in contours removed.

Return type:

dict