Source code for tiatoolbox.wsicore.slide_info

"""Get Slide Meta Data information."""
import pathlib

from tiatoolbox.wsicore.wsireader import WSIReader


[docs]def slide_info(input_path, verbose=True): """Return WSI meta data. Args: input_path (str or pathlib.Path): Path to whole slide image. verbose (bool): Print output, default=True. Returns: WSIMeta: Metadata information. Examples: >>> from tiatoolbox.wsicore.slide_info import slide_info >>> from tiatoolbox import utils >>> file_types = ("*.ndpi", "*.svs", "*.mrxs", "*.jp2") >>> files_all = utils.misc.grab_files_from_dir(input_path, ... file_types=file_types) >>> for curr_file in files_all: ... slide_param = slide_info(input_path=curr_file) ... utils.misc.save_yaml(slide_param.as_dict(), ... str(slide_param.file_path) + ".yaml") ... print(slide_param.as_dict()) """ input_path = pathlib.Path(input_path) if verbose: print(input_path.name, flush=True) wsi = WSIReader.open(input_img=input_path) info = wsi.info if verbose: print(info.as_dict()) return info